Survival analysis, including penalised likelihood.


Documentation for package `survival' version 2.17

Help Pages

A B C D F H I J K L M O P R S T U V misc

-- A --

aml Acute Myelogenous Leukemia survival data
anova.coxph Analysis of Deviance for Cox model.
anova.coxphlist Analysis of Deviance for Cox model.
anova.survreg Regression for a Parametric Survival Model
anova.survreglist Regression for a Parametric Survival Model
as.character.date Date Objects
as.character.Surv Create a Survival Object
as.data.frame.date Date Objects
as.data.frame.Surv Create a Survival Object
as.date Coerce Data to Dates
as.vector.date Date Objects
attrassign Create new-style "assign" attribute

-- B --

basehaz Compute a Survival Curve for Censored Data
bladder Bladder Cancer Recurrences
bladder2 Bladder Cancer Recurrences

-- C --

cancer Mayo Clinic Lung Cancer Data
censorReg Regression for a Parametric Survival Model
clogit Conditional logistic regression
cluster Identify Clusters
colon Chemotherapy for Stage B/C colon cancer
cox.zph Test the Proportional Hazards Assumption of a Cox Regression
coxph Fit Proportional Hazards Regression Model
coxph.control Package options for survreg and coxph
coxph.detail Details of a Cox Model Fit
coxph.getdata Fit Proportional Hazards Regression Model
coxph.object Proportional Hazards Regression Object
coxph.penalty Fit Proportional Hazards Regression Model

-- D --

date.ddmmmyy Format a Julian date
date.mdy Convert from Julian Dates to Month, Day, and Year
date.mmddyy Format a Julian date
date.mmddyyyy Format a Julian date

-- F --

format.Surv Create a Survival Object
frailty (Approximate) Frailty models

-- H --

heart Stanford Heart Transplant data

-- I --

is.date Date Objects
is.na.date Date Objects
is.na.ratetable Ratetable reference in formula
is.na.Surv Create a Survival Object
is.ratetable Verify that an Object is of Class `ratetable'
is.Surv Create a Survival Object

-- J --

jasa Stanford Heart Transplant data
jasa1 Stanford Heart Transplant data

-- K --

kidney Kidney data from survival5

-- L --

labels.survreg Regression for a Parametric Survival Model
leukemia Acute Myelogenous Leukemia survival data
lines.survfit Add Lines or Points to a Survival Plot
lung Mayo Clinic Lung Cancer Data

-- M --

Math.date Date Objects
Math.ratetable Verify that an Object is of Class `ratetable'
Math.Surv Create a Survival Object
mdy.date Convert to Julian Dates
model.frame.coxph Fit Proportional Hazards Regression Model
model.frame.survreg Regression for a Parametric Survival Model

-- O --

Ops.date Date Objects
Ops.ratetable Verify that an Object is of Class `ratetable'
Ops.Surv Create a Survival Object
ovarian Ovarian cancer survival data

-- P --

pbc Mayo Clinic Primary Biliary Cirrhosis Data
plot.cox.zph Graphical Test of Proportional Hazards
plot.date Date Objects
plot.survfit Plot Method for `survfit'
points.survfit Add Lines or Points to a Survival Plot
predict.coxph Predictions for Cox model
predict.survreg Predicted Values for a `survreg' Object
print.cox.zph Test the Proportional Hazards Assumption of a Cox Regression
print.coxph Proportional Hazards Regression Object
print.coxph.null Fit Proportional Hazards Regression Model
print.coxph.penal Fit Proportional Hazards Regression Model
print.date Date Objects
print.ratetable Ratetable reference in formula
print.summary.survfit Summary of a Survival Curve
print.summary.survreg Regression for a Parametric Survival Model
print.Surv Create a Survival Object
print.survdiff Test Survival Curve Differences
print.survexp Compute Expected Survival
print.survfit Print a Short Summary of a Survival Curve
print.survreg Parametric Survival Model Object
print.survreg.penal Regression for a Parametric Survival Model
pspline Penalised smoothing splines
pyears Person Years

-- R --

ratetable Ratetable reference in formula
ratetables Census Data Sets for the Expected Survival and Person Years Functions
rats Rat data from survival5
residuals.coxph Calculate Residuals for a `coxph' Fit
residuals.survreg Compute Residuals for `survreg' Objects
ridge Ridge regression

-- S --

stanford2 More Stanford Heart Transplant data
strata Identify Stratum Variables
summary.coxph Proportional Hazards Regression Object
summary.coxph.penal Fit Proportional Hazards Regression Model
Summary.date Date Objects
summary.date Date Objects
summary.ratetable Ratetable reference in formula
Summary.Surv Create a Survival Object
summary.survfit Summary of a Survival Curve
summary.survreg Parametric Survival Model Object
Surv Create a Survival Object
survdiff Test Survival Curve Differences
survexp Compute Expected Survival
survexp.az Census Data Sets for the Expected Survival and Person Years Functions
survexp.azr Census Data Sets for the Expected Survival and Person Years Functions
survexp.cfit Compute Expected Survival
survexp.fit Work Function to Compute Expected Survival
survexp.fl Census Data Sets for the Expected Survival and Person Years Functions
survexp.flr Census Data Sets for the Expected Survival and Person Years Functions
survexp.mn Census Data Sets for the Expected Survival and Person Years Functions
survexp.mnwhite Census Data Sets for the Expected Survival and Person Years Functions
survexp.us Census Data Sets for the Expected Survival and Person Years Functions
survexp.usr Census Data Sets for the Expected Survival and Person Years Functions
survexp.uswhite Census Data Sets for the Expected Survival and Person Years Functions
survexp.wnc Census Data Sets for the Expected Survival and Person Years Functions
survfit Compute a Survival Curve for Censored Data
survfit.coxph.null Compute a Survival Curve for Censored Data
survfit.km Compute a Survival Curve for Censored Data
survfit.object Survival Curve Object
survobrien O'Brien's Test for Association of a Single Variable with Survival
survReg Regression for a Parametric Survival Model
survreg Regression for a Parametric Survival Model
survreg.control Package options for survreg and coxph
survreg.distributions Parametric Survival Distributions
survreg.object Parametric Survival Model Object
survreg.old Old (survival4) Regression for a parametric survival model
survSplit Split a survival data set at specified times

-- T --

tcut Factors for person-year calculations
tobin Tobin's Tobit data

-- U --

untangle.specials Help Process the `specials' Argument of the `terms' Function.

-- V --

vcov.coxph Fit Proportional Hazards Regression Model
vcov.survreg Regression for a Parametric Survival Model
veteran Veterans' Administration Lung Cancer study

-- misc --

[.cox.zph Test the Proportional Hazards Assumption of a Cox Regression
[.coxph.penalty Fit Proportional Hazards Regression Model
[.date Date Objects
[.ratetable Ratetable reference in formula
[.ratetable2 Ratetable reference in formula
[.Surv Create a Survival Object
[.survfit Compute a Survival Curve for Censored Data
[.tcut Factors for person-year calculations
[[.date Date Objects